DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and prrx1a

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_999899.1 Gene:prrx1a / 406431 ZFINID:ZDB-GENE-020905-5 Length:245 Species:Danio rerio


Alignment Length:177 Identity:40/177 - (22%)
Similarity:78/177 - (44%) Gaps:35/177 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 HHMNAQMTLPHHM--------GHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQ 245
            |.|:.|.|||:.:        .|.||:..::   |..:.::.:....:|...::|    .|...:
Zfish     7 HVMDRQATLPNRLETAITANQDHLQAKKNFS---VSHLLDLEEAREMVGAQAEES----AGEAGR 64

  Fly   246 GMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTL 310
            .|:..    |.:..|     :..:|..|.|           :.::..|.::::|.|.|:...|..
Zfish    65 SMLES----PGLTSG-----SDTTQQENEQ-----------LNAEEKKKRKQRRNRTTFNSSQLQ 109

  Fly   311 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 357
            .||:.|....|.....|.::|..:.|||.::::||||||.|:::..:
Zfish   110 ALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNER 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 23/124 (19%)
Homeodomain 298..354 CDD:459649 20/55 (36%)
prrx1aNP_999899.1 Homeodomain 101..153 CDD:459649 18/51 (35%)
OAR 220..237 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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