Protein Alignment Antp and cdx1a

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_998001.2
• Gene: cdx1a / 405762
• ZFINID: ZDB-GENE-050510-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 189
• Identity: 65/189 - (34%)
• Similarity: 90/189 - (47%)
• Gaps: 41/189 - (21%)

  Fly   202 GHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQ------GP------ 254
            |:|...|        ::::.|.|.:....|...||..|..|....:.|.|.      ||
Zfish    13 GNPARHL--------NLSQPHLNVYPSAPYPDYSGYHPGPALGNDLHHTGSSWSPGFGPGSRDDW 69

  Fly   255 PQMHQGHPGQHTPPSQN------PNSQS---SGMP----SPLYPWMR------SQFGKCQERKRG 300
            |.:: ||...|:.|:..      |:...   ||.|    .| ..|||      :..||.:.:.:.
Zfish    70 PPLY-GHGTGHSLPANGVEVSVLPSVDQGLLSGAPVDREEP-QDWMRRSAVPTNPGGKTRTKDKY 132

  Fly   301 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            |..|:..|.|||||||||:||:|.||:.|:|..|.|:|||:||||||||.|.:|.||.:
Zfish   133 RVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRRAKERKMNKKR 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	31/134 (23%)
		Homeodomain	298..354	CDD:459649	33/55 (60%)
cdx1a	NP_998001.2	Caudal_act	11..123	CDD:461413	27/119 (23%)
		Homeodomain	131..186	CDD:459649	33/54 (61%)