Protein Alignment Antp and Lmx1a

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Alignment Length: 508
• Identity: 94/508 - (18%)
• Similarity: 126/508 - (24%)
• Gaps: 218/508 - (42%)

  Fly    45 YSQNANHQGNMPYPRF---PPYDRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQL 106
            ||...||.|    .||   |....|...:|..:     |...|..:.|:|..|...|.| |....
  Fly    19 YSLQQNHGG----ARFLDNPNPGSMTASSGNSL-----HLSNSNNNLPTSISGNNSPTA-TASLT 73

  Fly   107 GVPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQV------------------------- 146
            |..||.||||.|    ||||...|..||.|||....|..|
  Fly    74 GQHQQHQQQQHQ----QQQQHPHQQHQQHQQQHAASTTPVPINSCPTPTGHSPLSSSSSNSNHNN 134

  Fly   147 -----------------------------------------THPQQQQQQPVVYASCKLQAAVGG 170
                                                     |.....|....|.|:....||...
  Fly   135 NNNNNNGGSSSNNLHSACNTLTAAAVAAASAAAVAAPSPAGTSVATSQLGGAVAAAIAAAAAAAA 199

  Fly   171 LGMVP---------------------------------EGGSPPLVDQMSGHHMNAQMTLPHHMG 202
            ....|                                 .||........:...::|..:....:|
  Fly   200 AATTPTSTGPAATGSGNANGSGNGNGNGNGNGNGNGNGNGGGAATASAAAASKLSADCSGRTEVG 264

  Fly   203 HPQAQLGYT----------DVGVPDVTEVH-------------QNHHNMGM----------YQQQ 234
            |.:.:..:.          |..:.:|.:.:             |.||...:          |.:.
  Fly   265 HIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRL 329

  Fly   235 SGVP-----------------------------------PVGAPPQGMMHQGQ------------ 252
            .||.                                   |:....|.|:..||
  Fly   330 FGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRHDLEKEM 394

  Fly   253 ---GPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEK 314
               .....|.|..|........|.   .|...|               ||.|...|..|..:.:.
  Fly   395 FLAAAAAQHCGFVGLDEEDLLRPR---DGRRGP---------------KRPRTILTSQQRKQFKA 441

  Fly   315 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK-ENKTKGEPGSGG 366
            .|..:....|:.|..:|....|:.|.:::||||:|.|.|| :.|.|...||||
  Fly   442 SFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGG 494

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	30/260 (12%)
		Homeodomain	298..354	CDD:459649	17/55 (31%)
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	5/51 (10%)
		LIM	333..388	CDD:413332	5/54 (9%)
		Homeodomain	425..481	CDD:459649	17/55 (31%)