DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and PHDP

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster


Alignment Length:152 Identity:43/152 - (28%)
Similarity:67/152 - (44%) Gaps:33/152 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 HQNHHNM---GMYQ---QQSGVPPVGAPPQGMMHQGQG-----PPQMHQGHPGQHTPPSQNPNSQ 275
            |.||:|:   ..|:   .:|.:       :|.::|...     ...:.:.:|..|...|.|.:..
  Fly    38 HINHYNLMIDSSYKLCANESAI-------RGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDFH 95

  Fly   276 -----SSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 335
                 ..|:         |...|.::| |.|.|:|..|..||||.|....|.....|.|||..|.
  Fly    96 LKSYGDDGL---------SLTDKSKQR-RIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLH 150

  Fly   336 LTERQIKIWFQNRRMKWKKENK 357
            |||.::::||||||.|::|:.:
  Fly   151 LTEARVQVWFQNRRAKFRKQER 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 19/99 (19%)
Homeodomain 298..354 CDD:459649 26/55 (47%)
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 27/56 (48%)

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