DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and lms

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_611491.2 Gene:lms / 37322 FlyBaseID:FBgn0034520 Length:378 Species:Drosophila melanogaster


Alignment Length:59 Identity:29/59 - (49%)
Similarity:38/59 - (64%) Gaps:0/59 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 355
            :||.|..::..|...||.||...:||:..:|..:|..|.|||.||||||||||.|||::
  Fly    86 KKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 3/8 (38%)
Homeodomain 298..354 CDD:459649 28/55 (51%)
lmsNP_611491.2 Cnd2 33..>106 CDD:450400 7/19 (37%)
Homeodomain 87..143 CDD:459649 28/55 (51%)

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