Protein Alignment Antp and Hoxc9

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001094377.1
• Gene: Hoxc9 / 368178
• RGDID: 1595784
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 236
• Identity: 76/236 - (32%)
• Similarity: 100/236 - (42%)
• Gaps: 59/236 - (25%)

  Fly   166 AAVGGLGMVPEGGS--------PPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVH 222
            ||....|:||:...        .|.|...|...:.:|.::.:|...||..||            .
  Rat    36 AAARPSGLVPDCSDFPSCSFAPKPAVFSTSWAPVPSQSSVVYHPYGPQPHLG------------A 88

  Fly   223 QNHHNMGMYQQQSGVPPVGAPPQGMMH------------------QGQGPPQMHQGHPGQ--HTP 267
            ...:.....:..||.....:.|.|..|                  .|:..|....|.||:  ...
  Rat    89 DTRYMRTWLEPLSGAVSFPSFPAGGRHYALKPDAYPGRRADCGPGDGRSYPDYMYGSPGELRDRA 153

  Fly   268 PSQNPNSQSSGM-------------PS-PLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHF 318
            |...|:.::..:             || |:..|:.::    ..||: |..||:||||||||||.|
  Rat   154 PQTLPSPEADALAGSKHKEEKADLDPSNPVANWIHAR----STRKK-RCPYTKYQTLELEKEFLF 213

  Fly   319 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            |.||||.||.|:|..|.|||||:||||||||||.||.||.|
  Rat   214 NMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEK 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	34/181 (19%)
		Homeodomain	298..354	CDD:459649	40/55 (73%)
Hoxc9	NP_001094377.1	Hox9_act	1..179	CDD:461369	26/154 (17%)
		Homeodomain	193..241	CDD:459649	34/48 (71%)