DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and pnx

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_840087.1 Gene:pnx / 352939 ZFINID:ZDB-GENE-030328-42 Length:182 Species:Danio rerio


Alignment Length:111 Identity:41/111 - (36%)
Similarity:54/111 - (48%) Gaps:15/111 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 TPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 330
            |.|:|.|::          |.:.:......:.||.|..:|..|...||:.|..:.||:...|..|
Zfish    46 TSPTQEPSA----------PNIANASAAKVKSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCI 100

  Fly   331 AHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNS 376
            |.||.|:|.|:||||||||.|||||     ..|.|||......|.:
Zfish   101 ASALGLSETQVKIWFQNRRTKWKKE-----LDGHGGEEQSHCAPTA 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 8/39 (21%)
Homeobox 301..354 CDD:395001 26/52 (50%)
pnxNP_840087.1 Important for interaction with tle3a. /evidence=ECO:0000269|PubMed:12642490 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..63 5/26 (19%)
Homeobox 71..123 CDD:278475 25/51 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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