DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and bsh

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster


Alignment Length:386 Identity:90/386 - (23%)
Similarity:115/386 - (29%) Gaps:160/386 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 SSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQ-- 152
            ||...|:  .|.||                  |...:.::.|.:..:...........||.|.  
  Fly    63 SSDTNGI--AANTN------------------NYAPKSSRNAVKSARSAFAHDNNPHKHPSQHSH 107

  Fly   153 --QQQPVVYASCKL-------QAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQL 208
              |..|...||...       |||.|..|            :..|..|::.....||..|     
  Fly   108 PPQSHPPASASASATATARSNQAASGYAG------------EDYGKSMHSTPRSNHHSRH----- 155

  Fly   209 GYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQN-- 271
                         ..:|:|.....||.|......||.... |.|.||           ||..|  
  Fly   156 -------------GTSHYNGDQISQQLGSGAAQHPPVPTT-QPQPPP-----------PPPLNGG 195

  Fly   272 ---------PN----------------SQSSGMPSPLYPWMRSQ---------FG---------- 292
                     ||                |.|||....:.|:..||         ||          
  Fly   196 SGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELAL 260

  Fly   293 ----------KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 347
                      .|:.|| .|..::..|...|||.|...|||:...|:|:|.||.|:|.|:|.||||
  Fly   261 GLGMGVNALRHCRRRK-ARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQN 324

  Fly   348 RRMKWKKENK-----------TKGEPGS-------------------GGEGDEITPPNSPQ 378
            ||||.||:.:           ::.|||.                   |..|...|.|.|.|
  Fly   325 RRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQ 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 40/207 (19%)
Homeodomain 298..354 CDD:459649 27/55 (49%)
bshNP_477350.2 Homeodomain 275..331 CDD:459649 28/56 (50%)

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