DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and HOXD13

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_000514.2 Gene:HOXD13 / 3239 HGNCID:5136 Length:343 Species:Homo sapiens


Alignment Length:230 Identity:66/230 - (28%)
Similarity:90/230 - (39%) Gaps:65/230 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 YASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLG------YTDV---- 213
            |.||::...|                   |...||..:.||      |.||      |.||    
Human   135 YYSCRMSHGV-------------------GLQQNALKSSPH------ASLGGFPVEKYMDVSGLA 174

  Fly   214 --GVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQ----GQGPPQMHQGHPG----QHTPP 268
              .|| ..||......:..||..:.  |....| |.:..    |.|.|: |:.:..    |....
Human   175 SSSVP-ANEVPARAKEVSFYQGYTS--PYQHVP-GYIDMVSTFGSGEPR-HEAYISMEGYQSWTL 234

  Fly   269 SQNPNSQ---SSGMPSPLYPWMRS--------QFGKCQERKRGRQ---TYTRYQTLELEKEFHFN 319
            :...|||   :...|...:.|..|        |...|..| |||:   .||:.|..|||.|:..|
Human   235 ANGWNSQVYCTKDQPQGSHFWKSSFPGDVALNQPDMCVYR-RGRKKRVPYTKLQLKELENEYAIN 298

  Fly   320 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 354
            :::.:.:|..|:.|..|:|||:.|||||||:|.||
Human   299 KFINKDKRRRISAATNLSERQVTIWFQNRRVKDKK 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 41/178 (23%)
Homeodomain 298..354 CDD:459649 26/58 (45%)
HOXD13NP_000514.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
polyalanine repeat 57..71
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..115
HoxA13_N <100..172 CDD:463521 15/61 (25%)
Homeodomain 277..333 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.