DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and HOXD4

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens


Alignment Length:237 Identity:87/237 - (36%)
Similarity:106/237 - (44%) Gaps:56/237 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQ---------S 235
            ||..:.:.|.::..| ...::.|..|.    .|...|            |:|.:.         |
Human    18 PPCEEYLQGGYLGEQ-GADYYGGGAQG----ADFQPP------------GLYPRPDFGEQPFGGS 65

  Fly   236 GVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTP--------------------PSQNPNSQSSGMP 280
            |..|..|.|.....|..|.|..|...||:..|                    |.|.|:..:...|
Human    66 GPGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPPAPPPAPLPGARAYSQSDPKQPPSGTALKQP 130

  Fly   281 SPLYPWMRSQFGKC-------QERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 338
            :.:||||:......       .|.||.|..|||.|.|||||||||||||||||||||||.|||:|
Human   131 AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSE 195

  Fly   339 RQIKIWFQNRRMKWKKENK---TKGEPGSGGEGDEITPPNSP 377
            ||||||||||||||||::|   |||...|.......:...:|
Human   196 RQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSSSCSSSVAP 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 35/161 (22%)
Homeodomain 298..354 CDD:459649 48/55 (87%)
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127 22/112 (20%)
Antp-type hexapeptide 133..138 3/4 (75%)
Homeodomain 155..211 CDD:459649 48/55 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255 6/26 (23%)

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