DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and CG11085

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:111 Identity:37/111 - (33%)
Similarity:55/111 - (49%) Gaps:18/111 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 SSGMPSPLYPWMRSQFGKCQERKRGRQT-YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 339
            |.|..|..|...:.|..|...:.|.|:| :|..|...||::|...:||:...|.::|..|.|:|.
  Fly   138 SGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSET 202

  Fly   340 QIKIWFQNRRMKWKKENKTKGEP-----------------GSGGEG 368
            |:|.|:||||.|||::|:.:.|.                 |:||.|
  Fly   203 QVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAGGLG 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 9/30 (30%)
Homeodomain 298..354 CDD:459649 24/56 (43%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 24/55 (44%)

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