DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and HOXB3

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_016880049.1 Gene:HOXB3 / 3213 HGNCID:5114 Length:578 Species:Homo sapiens


Alignment Length:379 Identity:97/379 - (25%)
Similarity:137/379 - (36%) Gaps:143/379 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 PSSQVGGVMPQAQTNGQLGVPQQQQ-----QQQQQPSQNQQQQQAQQAPQQLQQQ---------- 138
            |..|:||.:     .|..|:.:.::     .:::.||..:.....|.||.:.|:.          
Human    93 PLPQLGGTL-----GGCWGLLRVERLGCGWLRRRSPSLGRGSGAWQSAPARTQRPAARRCPRPSG 152

  Fly   139 --------------------------LP-QVTQQVTHPQQQQQQPVVYASCKLQAAVGGLG-MVP 175
                                      || .|.:..||.:...|:    ::|.||:    || ..|
Human   153 RPHRRGDLSPAARSGARCEYILCLPVLPSSVAKAATHLEGDYQR----SACSLQS----LGNAAP 209

  Fly   176 EGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPV 240
            ...|    .:::|..|...:. |..:..|.        |.|                     ||.
Human   210 HAKS----KELNGSCMRPGLA-PEPLSAPP--------GSP---------------------PPS 240

  Fly   241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRS--QFGKCQER------ 297
            .||.....:...|      |.|.:..||...|.:.|: :...::|||:.  |..|.:..      
Human   241 AAPTSATSNSSNG------GGPSKSGPPKCGPGTNST-LTKQIFPWMKESRQTSKLKNNSPGTAE 298

  Fly   298 -------------------------------------KRGRQTYTRYQTLELEKEFHFNRYLTRR 325
                                                 ||.|..||..|.:||||||||||||.|.
Human   299 GCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRP 363

  Fly   326 RRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG-EPGSGGEGDEITPPNSPQ 378
            ||:|:|:.|.|:||||||||||||||:||:.|.|| ...|||.....:||...|
Human   364 RRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQ 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 33/190 (17%)
Homeodomain 298..354 CDD:459649 39/55 (71%)
HOXB3XP_016880049.1 Homeodomain 336..392 CDD:459649 39/55 (71%)
DUF4074 513..576 CDD:463833
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.