DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and HOXA6

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_076919.1 Gene:HOXA6 / 3203 HGNCID:5107 Length:233 Species:Homo sapiens


Alignment Length:241 Identity:99/241 - (41%)
Similarity:116/241 - (48%) Gaps:69/241 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 MSGHHMNAQM--TLP----HHMGH-PQAQLGYTDV----------GVPDVTEVHQNHHNMGMYQQ 233
            ||.:.:|...  :||    ..:|. |..|.||..:          .:||.|     :.:...|||
Human     1 MSSYFVNPTFPGSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLPDKT-----YTSPCFYQQ 60

  Fly   234 QSGVPPV-------------------GAPPQGMMHQGQGP-PQMHQGHPGQHTPPSQNPNSQSSG 278
            .:.|...                   ||.|.|...| :|| ..:|.....|:.|.|      |||
Human    61 SNSVLACNRASYEYGASCFYSDKDLSGASPSGSGKQ-RGPGDYLHFSPEQQYKPDS------SSG 118

  Fly   279 M-------------PSPLYPWMRSQFGKC------QERKRGRQTYTRYQTLELEKEFHFNRYLTR 324
            .             .||:||||: :...|      ...:||||||||||||||||||||||||||
Human   119 QGKALHDEGADRKYTSPVYPWMQ-RMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTR 182

  Fly   325 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDE 370
            |||||||:|||||||||||||||||||||||||........||..|
Human   183 RRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSE 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 44/175 (25%)
Homeodomain 298..354 CDD:459649 53/55 (96%)
HOXA6NP_076919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..127 12/44 (27%)
Antp-type hexapeptide 136..141 3/4 (75%)
Homeodomain 156..212 CDD:459649 53/55 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233 5/15 (33%)

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