DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and dlx1a

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571380.1 Gene:dlx1a / 30568 ZFINID:ZDB-GENE-990415-48 Length:252 Species:Danio rerio


Alignment Length:215 Identity:56/215 - (26%)
Similarity:83/215 - (38%) Gaps:51/215 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 LQAAVGGLGMVPEGGSPPLVDQMS------GHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVH 222
            |.:.|.|..:..|.|.|.  .|||      ||:   .|...|..||||....|:           
Zfish    10 LNSPVSGKSVFMEFGPPS--QQMSPSSMTHGHY---SMHCLHSSGHPQHDSAYS----------- 58

  Fly   223 QNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGM-----PSP 282
                            |..:.|:.:.:........|...|...|..:. ||:.:...     |:|
Zfish    59 ----------------PAPSFPRSLPYPYVNSVGSHSSSPYLSTVQTY-PNNSALAQTRLEDPAP 106

  Fly   283 ------LYPWMRSQF-GKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 340
                  :......:| ||.::.::.|..|:..|...|.:.|...:||....|.|:|.:|.||:.|
Zfish   107 ESEKNTVVEGGEVRFNGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQ 171

  Fly   341 IKIWFQNRRMKWKKENKTKG 360
            :||||||:|.|:||..|..|
Zfish   172 VKIWFQNKRSKFKKLMKQGG 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 32/159 (20%)
Homeodomain 298..354 CDD:459649 22/55 (40%)
dlx1aNP_571380.1 Homeodomain 129..185 CDD:459649 22/55 (40%)

Return to query results.
Submit another query.