DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and emx2

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571355.2 Gene:emx2 / 30537 ZFINID:ZDB-GENE-990415-54 Length:247 Species:Danio rerio


Alignment Length:237 Identity:58/237 - (24%)
Similarity:93/237 - (39%) Gaps:46/237 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 QPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMG-HPQAQLGYTDVGVPDV 218
            ||.......:::.|.....:|...|...:...:..:.|:....|...| |...:..|::.|:   
Zfish     3 QPTPKRCFTIESLVAKDNPLPSSRSEEPIRPAALSYANSSQMNPFLNGFHSSGRGVYSNPGL--- 64

  Fly   219 TEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHP--GQHTPPSQNPNSQSSGMPS 281
                       ::.:....||..|.|   :| ...||.....||  ..|:|.....:.|..  ||
Zfish    65 -----------VFAEAVSHPPNSAVP---VH-SVPPPHALAAHPLSSSHSPHPLFASQQRD--PS 112

  Fly   282 PLYPWMRSQFGKCQERKRGRQT---------------------YTRYQTLELEKEFHFNRYLTRR 325
            ..|||:..::.....|.:|.:|                     ::..|.|.||..|..|.|:...
Zfish   113 TFYPWLIHRYRYLGHRFQGNETSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGA 177

  Fly   326 RRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGE 367
            .|.::||:|.|||.|:|:||||||.|:|::...  |.||..:
Zfish   178 ERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLE--EEGSDSQ 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 29/168 (17%)
Homeodomain 298..354 CDD:459649 25/76 (33%)
emx2NP_571355.2 Homeodomain 150..206 CDD:459649 23/55 (42%)

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