DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and emx3

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571354.1 Gene:emx3 / 30536 ZFINID:ZDB-GENE-990415-53 Length:233 Species:Danio rerio


Alignment Length:207 Identity:53/207 - (25%)
Similarity:86/207 - (41%) Gaps:44/207 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGM 247
            ::.:.|...|:..........|.| |.:|:       .:|.:  ..|...|.||.....:.|:.|
Zfish    11 IESLVGKDSNSSNAAADEPIRPTA-LRFTE-------SIHPS--PFGSCFQNSGRTLYSSSPEMM 65

  Fly   248 MHQGQGPPQMHQGHPG---QH----TPPSQNPNSQSSGMPSPLYPW-MRSQF------------- 291
            ...    |..|..:.|   :|    |.|..:|:.:.:   ...||| :|:::             
Zfish    66 FTD----PSTHSTNSGLSLRHLQIPTQPFFSPHQRDT---LNFYPWVLRNRYLGHRFQGDDSSPE 123

  Fly   292 -----GKCQER-KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 350
                 |....: ||.|..::..|.|.||:.|..|.|:....|.::|:.|||||.|:|:||||||.
Zfish   124 NLLLHGPFSRKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANGLCLTETQVKVWFQNRRT 188

  Fly   351 KWKKENKTKGEP 362
            |.|::...:..|
Zfish   189 KHKRQKLEEESP 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 28/149 (19%)
Homeodomain 298..354 CDD:459649 26/55 (47%)
emx3NP_571354.1 Homeodomain 136..192 CDD:459649 26/55 (47%)

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