DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and hoxb8b

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:199 Identity:79/199 - (39%)
Similarity:94/199 - (47%) Gaps:61/199 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 YQQQSGVPPVGAPP---------QGMMHQGQGPPQMHQG-----------------HPGQHT--- 266
            |...|..|.:|..|         ....|..|.|...|.|                 :||..|   
Zfish    24 YDCPSYTPDLGGRPSVLYGHNTGSAFQHAAQFPDFYHHGTSSFPHASYQQTPCAVAYPGDATGNI 88

  Fly   267 --------------PPSQ-----NPNSQSSGM----------PSPLYPWMRSQFGKCQERKRGRQ 302
                          |.|.     :.|.:.||:          .:.|:||||.|   ...|:||||
Zfish    89 LGQDGLQKQSFFGAPDSDFTQFGDCNLKVSGIRDDLESAEPCTAQLFPWMRPQ---ATGRRRGRQ 150

  Fly   303 TYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGE 367
            ||:|||||||||||.||.||||:||||::|||.|||||:||||||||||||||:.....|.|..|
Zfish   151 TYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEHNKDKFPSSKAE 215

  Fly   368 GDEI 371
            .:||
Zfish   216 QEEI 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 31/132 (23%)
Homeodomain 298..354 CDD:459649 46/55 (84%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 3/4 (75%)
Homeodomain 146..202 CDD:459649 46/55 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 8/19 (42%)

Return to query results.
Submit another query.