DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and pou3f2b

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571235.1 Gene:pou3f2b / 30397 ZFINID:ZDB-GENE-980526-370 Length:378 Species:Danio rerio


Alignment Length:363 Identity:67/363 - (18%)
Similarity:103/363 - (28%) Gaps:172/363 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PSQNQQQQQAQQAPQ---------QLQQQLPQVTQQVTHPQQQQQ-------------------Q 155
            |...|..:.|.|:|:         |.|.:.|.:..| ||......                   |
Zfish    74 PLGEQDIKPAVQSPRDEMHNSSNLQHQSRPPHLVHQ-THGNHHDSRAWRTTTAAHIPSMATSNGQ 137

  Fly   156 PVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTE 220
            .::|:    |.:....|::|..|        .|.|        ||                .:.:
Zfish   138 SLIYS----QPSFSVNGLIPGSG--------QGIH--------HH----------------SMRD 166

  Fly   221 VHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYP 285
            .|::||:..:...       |.||....||..   |.|..|..:.||.|.:              
Zfish   167 AHEDHHSPHLSDH-------GHPPSQHQHQSH---QSHHDHSDEDTPTSDD-------------- 207

  Fly   286 WMRSQFGKCQERKR----------------------GRQTYTRYQTLE----------------- 311
              ..||.|..:::|                      .:.|..|::.|:                 
Zfish   208 --LEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWL 270

  Fly   312 ------------LEKEFHFNRYLTRRRRIEI------------------------AHALCLTERQ 340
                        |:|.....|...:|..||:                        |.:|.|.:..
Zfish   271 EEADSTSGSPTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEITSLADSLQLEKEV 335

  Fly   341 IKIWFQNRRMKWKKENKTKGEPGSGGE---GDEITPPN 375
            :::||.|||.| :|.....|.|..|.|   ||  |||:
Zfish   336 VRVWFCNRRQK-EKRMTPPGGPLPGTEDVYGD--TPPH 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 27/166 (16%)
Homeobox 301..354 CDD:395001 18/105 (17%)
pou3f2bNP_571235.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..118 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..205 19/95 (20%)
POU 200..274 CDD:197673 10/89 (11%)
Homeobox 295..348 CDD:278475 12/53 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..378 10/26 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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