DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxb1b

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:283 Identity:78/283 - (27%)
Similarity:110/283 - (38%) Gaps:62/283 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 PQQQQQQPVVYASCKLQAAVGGLGMVPEG----------------GSPPLVDQMSGHHMNAQMTL 197
            |.:|:..|...||..        ..:|||                |:.....|....|:|..|..
Zfish    25 PVEQEYLPSACASTN--------SYIPEGRPVGGNTFTSAPHETHGTSYAQIQSQPFHLNVDMGK 81

  Fly   198 PHHMGH-PQAQLGYTDVGVPDVTEVHQNH--------------HNMGMYQQQSGVP-PVGAPPQG 246
            ..|... .|.:..::|.|...|.....:|              .|:|.|.:.:..| .|.|....
Zfish    82 TGHSNFCKQTRPPHSDYGHQHVLTQADDHMRLQSPGFSVVNMGANIGTYSESNCRPGSVSASHYQ 146

  Fly   247 MMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMR-----------SQFGKCQERKRG 300
            ....|:..|..:.........|..:.:|:::...:|.:.||:           :::|...::...
Zfish   147 SYAYGEPEPHGYGSFSKYQVSPDSDSDSKTNIKQAPTFDWMKVKRNPPKTVKVAEYGIHGQQNII 211

  Fly   301 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEP--- 362
            |..:|..|..|||||||||:||||.||:|:|..|.|.|.|:||||||||||.||..|....|   
Zfish   212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEGTAPVIK 276

  Fly   363 -----GSGGEGDEIT---PPNSP 377
                 .||...|..|   |..||
Zfish   277 RVTLCSSGQNADHSTSSSPGASP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 30/187 (16%)
Homeodomain 298..354 CDD:459649 34/55 (62%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 2/18 (11%)
Antp-type hexapeptide 183..188 1/4 (25%)
Homeodomain 212..265 CDD:459649 34/52 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 10/35 (29%)

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