DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxb4a

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:204 Identity:81/204 - (39%)
Similarity:96/204 - (47%) Gaps:60/204 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 YTDVGVPDVTEVHQNHH-------------------NMGMYQQQSGVPPVGAPPQGMMHQGQGPP 255
            |.|...|...|..|:.:                   :..:|.|:||.    |.|.....||.|.|
Zfish    12 YVDPKFPPCEEYSQSDYLPSHSPDYYSAQRQDPSFQHESIYHQRSGC----ADPPYSSCQGPGQP 72

  Fly   256 Q---MHQGH-------------PGQH--------------TPPSQNPNSQSSGMPSPLYPWMR-- 288
            .   ..:||             |..|              ||.|||.::.||.....:||||:  
Zfish    73 AAVISPRGHVLPTTALSTPLPEPSHHCDSVTPSPPPACGQTPTSQNTSTVSSRKDPVVYPWMKKV 137

  Fly   289 -----SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 348
                 |......|.||.|..|||.|.||||||||:|||||||||:||||.|||:|||||||||||
Zfish   138 HVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNR 202

  Fly   349 RMKWKKENK 357
            ||||||::|
Zfish   203 RMKWKKDHK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 36/151 (24%)
Homeodomain 298..354 CDD:459649 46/55 (84%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 21/105 (20%)
Antp-type hexapeptide 130..135 3/4 (75%)
Homeodomain 152..208 CDD:459649 46/55 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246 1/2 (50%)

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