DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxb3a

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571192.2 Gene:hoxb3a / 30339 ZFINID:ZDB-GENE-990415-104 Length:417 Species:Danio rerio


Alignment Length:241 Identity:81/241 - (33%)
Similarity:107/241 - (44%) Gaps:82/241 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 GYTDVGVPDVTEVHQNH-HNMGMYQQQS-GVPPVG--APPQ----------GMMHQGQGPPQMHQ 259
            || |...|    ..||. |..|.||:.: .:..:|  ||||          |...:...||:.|.
Zfish    25 GY-DAPAP----AFQNSAHLEGDYQRSACSLQSLGTSAPPQPQHAKTKELNGSCMRPSLPPEHHP 84

  Fly   260 GHPGQHTPP-----------SQNP-----------------NSQSSGMPS------PLYPWMRSQ 290
              |.|.:||           :|.|                 :|:||.|.:      .::|||:..
Zfish    85 --PPQVSPPQNTVNVAATNATQQPGGSGGGGVAGSGGTSKSSSKSSSMATNPTLTKQIFPWMKES 147

  Fly   291 FGKCQER--------------------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 329
            ....:::                          ||.|..||..|.:||||||||||||.|.||:|
Zfish   148 RQNTKQKNSSPSASSANAESSGGEKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVE 212

  Fly   330 IAHALCLTERQIKIWFQNRRMKWKKENKTKG-EPGSGGEGDEITPP 374
            :|:.|.|:||||||||||||||:||:.|:|| ...|||.....:||
Zfish   213 MANLLNLSERQIKIWFQNRRMKYKKDQKSKGIGSSSGGPSPTGSPP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 36/170 (21%)
Homeobox 301..354 CDD:395001 37/52 (71%)
hoxb3aNP_571192.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..135 19/85 (22%)
Antp-type hexapeptide 140..145 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..184 2/36 (6%)
Homeobox 184..236 CDD:278475 37/51 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..290 9/22 (41%)
DUF4074 353..415 CDD:290032
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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