DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxa2b

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571181.1 Gene:hoxa2b / 30325 ZFINID:ZDB-GENE-990415-98 Length:363 Species:Danio rerio


Alignment Length:194 Identity:71/194 - (36%)
Similarity:90/194 - (46%) Gaps:66/194 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 PPVGAPPQG-------MMHQGQGPPQMHQ--------GHPGQHTPPSQNPNSQ----SSGMPSPL 283
            ||||...|.       :.|....||...|        .|| :|:.|.||||..    ::.:| |.
Zfish    26 PPVGDAFQSSSIKSSTLSHSTLIPPPFEQTIPSLNPGSHP-RHSRPKQNPNGSCPLPAASLP-PE 88

  Fly   284 YPWMRSQFGKCQER---------------------------------KRGRQTYTRYQTLELEKE 315
            ||||:.:  |..::                                 :|.|..||..|.||||||
Zfish    89 YPWMKEK--KASKKNQTTSTAATTDPGPLYFSPQGSPEISDGGSGATRRLRTAYTNTQLLELEKE 151

  Fly   316 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK------GEPGS----GGEGD 369
            ||||:||.|.||:|||..|.|||||:|:||||||||.|::.:.|      |:|.|    ||.||
Zfish   152 FHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENHHGDGKPPSLEEAGGRGD 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 27/119 (23%)
Homeobox 301..354 CDD:395001 37/52 (71%)
hoxa2bNP_571181.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..132 19/93 (20%)
Antp-type hexapeptide 88..93 3/4 (75%)
Homeobox 137..189 CDD:278475 37/51 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..218 11/30 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..279
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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