Protein Alignment Antp and Hoxc12

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001100266.1
• Gene: Hoxc12 / 300262
• RGDID: 1310539
• Length: 280
• Species: Rattus norvegicus
• Alignment Length: 168
• Identity: 54/168 - (32%)
• Similarity: 79/168 - (47%)
• Gaps: 46/168 - (27%)

  Fly   229 GMYQQQSGVPPVGAPPQGMMH-QGQGPPQM------------HQGHPG-QHTPPS-QNPNSQSS- 277
            |:.:::.|..|...|...::. :..|||.:            ..|:.| .|.||| |:..|.||
  Rat   106 GLKREERGREPGAGPGAALLQLEPSGPPALGFKYDYPAGGGGGDGNTGPPHDPPSCQSLESDSSS 170

  Fly   278 ------------GMP----SPL----------YPWMRSQFGKCQERKRGRQTYTRYQTLELEKEF 316
                        |.|    |||          .||....   .:.||: |:.|::.|..|||.||
  Rat   171 SLLNEGNKGASAGDPGSLVSPLNPGGGLSASGAPWYPIH---SRSRKK-RKPYSKLQLAELEGEF 231

  Fly   317 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 354
            ..|.::||:||.|::..|.|:::|:||||||||||.|:
  Rat   232 LVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKR 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	28/118 (24%)
		Homeodomain	298..354	CDD:459649	28/55 (51%)
Hoxc12	NP_001100266.1	Homeodomain	213..269	CDD:459649	29/56 (52%)