Protein Alignment Antp and Hoxa9

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001388797.1
• Gene: Hoxa9 / 297099
• RGDID: 1310001
• Length: 271
• Species: Rattus norvegicus
• Alignment Length: 274
• Identity: 86/274 - (31%)
• Similarity: 113/274 - (41%)
• Gaps: 78/274 - (28%)

  Fly   131 APQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQ--AAVGGLGMVP--EGGSPPLVDQMSGHHM 191
            ||..|.|...|......||.        ::.|..|  |||.|....|  ..|:..:...:..||
  Rat    31 APGALGQPQRQAAALAEHPD--------FSPCSFQSKAAVFGASWNPVHAAGANAVPAAVYHHH- 86

  Fly   192 NAQMTLPHH-MGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQ-----------SGVP---PVG 241
                   || ..||||.:.   ...||           |.|.:.           :|:|   |.|
  Rat    87 -------HHPYVHPQAPVA---AAAPD-----------GRYMRSWLEPTPGALSFAGLPSSRPYG 130

  Fly   242 APPQGM-MHQGQ-----------------GPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYP--- 285
            ..|:.: ..:|.                 .||...:..|.:......|..::|.|...|:.|
  Rat   131 IKPEPLSARRGDCPTLDTHTLSLTDYACGSPPVDREKQPSEGAFSENNAENESGGDKPPIDPNNP 195

  Fly   286 ---WMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 347
               |:.::    ..||: |..||::|||||||||.||.||||.||.|:|..|.|||||:||||||
  Rat   196 AANWLHAR----STRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQN 255

  Fly   348 RRMKWKKENKTKGE 361
            ||||.||.||.:.:
  Rat   256 RRMKMKKINKDRAK 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	39/187 (21%)
		Homeodomain	298..354	CDD:459649	39/55 (71%)
Hoxa9	NP_001388797.1	Hox9_act	1..192	CDD:461369	40/190 (21%)
		Homeodomain	206..262	CDD:459649	40/56 (71%)