DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and Dbx1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001009644.1 Gene:Dbx1 / 292934 RGDID:1308896 Length:335 Species:Rattus norvegicus


Alignment Length:278 Identity:64/278 - (23%)
Similarity:102/278 - (36%) Gaps:88/278 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 MVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQ---------NHHNM 228
            :.|..|.|.|:      .....:|||..:  ..|..|::...|.|:..:.:         ...::
  Rat     7 LAPPAGYPSLL------RPTPTLTLPQSL--QSAFSGHSSFLVEDLIRISRPPTYLPRSIPTASL 63

  Fly   229 GMYQQQ-------SGVPPVGAP---------PQGMMHQGQGPPQMHQG-------HPGQHTPPS- 269
            ...:|:       ||...:|:|         ||..:.....|..:..|       .|.:.|.|: 
  Rat    64 SPPRQEAPTALADSGTSDLGSPGSGSRRGSSPQTALSPASEPTFLKFGVNAILSSAPRRETSPAL 128

  Fly   270 -QNPNSQSSGMP---SPLYPWMRSQF---------------------GKCQERKRGRQTYTRYQT 309
             |:|..::...|   ....|::||.:                     ||.:.....|..::..|.
  Rat   129 LQSPPPKTFAFPYFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQR 193

  Fly   310 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK--KENK-------------TK 359
            ..|||.|...:|:::..|.::|..|.|.:.|:|||||||||||:  ||.:             ||
  Rat   194 KALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLPTK 258

  Fly   360 GEP-------GSGGEGDE 370
            ..|       |..|.|||
  Rat   259 LNPHPDLSDVGQKGPGDE 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 32/190 (17%)
Homeodomain 298..354 CDD:459649 23/57 (40%)
Dbx1NP_001009644.1 PRK12323 <49..182 CDD:481241 20/132 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..102 7/45 (16%)
Homeodomain 184..238 CDD:459649 23/53 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 10/37 (27%)

Return to query results.
Submit another query.