Protein Alignment Antp and Hoxd4

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 240
• Identity: 88/240 - (36%)
• Similarity: 101/240 - (42%)
• Gaps: 81/240 - (33%)

  Fly   186 MSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQ 250
            ||.:.:|::               |.|...|...|..|     |.|..:.|....|:..||...|
  Rat     3 MSSYMVNSK---------------YVDPKFPPCEEYLQ-----GGYLGEQGADYYGSGAQGSDFQ 47

  Fly   251 ------------------GQGP---------------PQMHQGHPG------------------Q 264
                              |.||               |..|...||                  |
  Rat    48 PPGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQ 112

  Fly   265 HTPPSQNPNSQSSGMPSPLYPWMRSQFGKC-------QERKRGRQTYTRYQTLELEKEFHFNRYL 322
            .|.|.|.|...:...|:.:||||:......       .|.||.|..|||.|.|||||||||||||
  Rat   113 PTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYL 177

  Fly   323 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK---TKGEPGS 364
            ||||||||||.|||:|||||||||||||||||::|   |||...|
  Rat   178 TRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSS 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	37/177 (21%)
		Homeodomain	298..354	CDD:459649	48/55 (87%)
Hoxd4	NP_001099355.1	Homeodomain	153..209	CDD:459649	48/55 (87%)