Protein Alignment Antp and Hoxd3

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001257967.1
• Gene: Hoxd3 / 288152
• RGDID: 1588601
• Length: 432
• Species: Rattus norvegicus
• Alignment Length: 303
• Identity: 93/303 - (30%)
• Similarity: 122/303 - (40%)
• Gaps: 88/303 - (29%)

  Fly   126 QQAQQAPQQLQQQLPQVTQQ------------------------VTHPQQQQQQPVV-------Y 159
            :|.|||     .:||:.|.|                        .:.|.|....|..       |
  Rat     4 EQGQQA-----LELPECTMQKAAYYENPGLFGGYGYSKATDAYGYSTPHQPYPPPAAANSLDSDY 63

  Fly   160 AS--CKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVH 222
            .|  |.:|::           :|.......|..:|.....|   |...:|.|......|.:....
  Rat    64 PSSACSIQSS-----------APLRAPAHKGAELNGSCMRP---GTGNSQGGGGGNQPPGLNSEQ 114

  Fly   223 QNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWM 287
            |        ..|...||...||....:.|.|.       |.:.|....|.:|.||.:...::|||
  Rat   115 Q--------PPQPPPPPPTLPPSSPTNPGSGV-------PAKKTKGGPNASSSSSTISKQIFPWM 164

  Fly   288 RS--QFGK-----------CQER-------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 332
            :.  |..|           |:::       ||.|..||..|.:||||||||||||.|.||:|:|:
  Rat   165 KESRQNSKQKNSCATSGENCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMAN 229

  Fly   333 ALCLTERQIKIWFQNRRMKWKKENKTKGEPGS-GGEGDEITPP 374
            .|.||||||||||||||||:||:.|.||...| .|:..|.:||
  Rat   230 LLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPAGQSPERSPP 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	35/166 (21%)
		Homeodomain	298..354	CDD:459649	40/55 (73%)
Hoxd3	NP_001257967.1	Homeodomain	195..251	CDD:459649	40/55 (73%)
		DUF4074	369..430	CDD:463833