Protein Alignment Antp and Hoxd1

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001099354.1
• Gene: Hoxd1 / 288151
• RGDID: 1309179
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 254
• Identity: 73/254 - (28%)
• Similarity: 98/254 - (38%)
• Gaps: 64/254 - (25%)

  Fly   140 PQVTQQVTHPQQQQQQPVV--YASCKLQAA------------VGGLGMVPEGGSPPLVDQM---S 187
            |..:..|...|....||..  ||.|.|:.|            .|.||..|....|..:.:.   |
  Rat    64 PTPSPPVAPAQPPGPQPAASRYAPCTLEGAYERGAAPASAAEYGFLGSGPAFDFPGALGRAADDS 128

  Fly   188 GHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQ 252
            |.|::...:.....|......|..|               ...:.:....|.....|.
  Rat   129 GPHVHYATSAVFSSGGSFLLSGQVD---------------FAAFAEPGPFPACLKEPA------- 171

  Fly   253 GPPQMHQGHPG--QHTPPS----QNPNSQSSGMPS--PLYPWMR-----------SQFGKCQERK 298
                  .||||  |...|:    ..|.|.:||:|:  ..:.||:           |::|......
  Rat   172 ------DGHPGPFQTVSPAPGACPKPASPTSGLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPSS 230

  Fly   299 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 357
            ..|..::..|..|||||||||:||||.||:|||:.|.|.:.|:||||||||||.||..:
  Rat   231 AIRTNFSTKQLTELEKEFHFNKYLTRARRMEIANCLQLNDTQVKIWFQNRRMKQKKRER 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	32/178 (18%)
		Homeodomain	298..354	CDD:459649	33/55 (60%)
Hoxd1	NP_001099354.1	COG5576	<208..325	CDD:227863	38/82 (46%)
		Homeodomain	233..286	CDD:459649	33/52 (63%)