DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and GBX1

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens


Alignment Length:340 Identity:87/340 - (25%)
Similarity:126/340 - (37%) Gaps:77/340 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GNMPYPRFPPYDRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQL--GVPQQQQQQ 115
            |::.|..:|.:  |||                ||        .|:|||.....|  |:|      
Human    39 GHLLYTGYPMF--MPY----------------RP--------LVLPQALAPAPLPAGLP------ 71

  Fly   116 QQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTH-PQQQQQQPVVYASCKLQAAVGGL-------- 171
            ...|..:...:........|.|.:|.:....|. |...:.....|...:|.||....        
Human    72 PLAPLASFAGRLTNTFCAGLGQAVPSMVALTTALPSFAEPPDAFYGPQELAAAAAAAAATAARNN 136

  Fly   172 ----GMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQ 232
                |..||||..  .|::    :.|:..:......|......|...:|...:|:.:....   .
Human   137 PEPGGRRPEGGLE--ADEL----LPAREKVAEPPPPPPPHFSETFPSLPAEGKVYSSDEEK---L 192

  Fly   233 QQSGVPPVGAPPQGMMHQGQGPPQMHQGH-------PGQHTPPSQN-PNSQSSGMP--SPLYPWM 287
            :.|...|.|:..:   .:|.|......|.       ||....|... ..|..:|..  :|:...:
Human   193 EASAGDPAGSEQE---EEGSGGDSEDDGFLDSSAGGPGALLGPKPKLKGSLGTGAEEGAPVTAGV 254

  Fly   288 RSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 352
            .:..||.:.|   |..:|..|.||||||||..:||:...|.:|||||.|:|.|:||||||||.||
Human   255 TAPGGKSRRR---RTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKW 316

  Fly   353 KK-----ENKTKGEP 362
            |:     .:...|||
Human   317 KRIKAGNVSSRSGEP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 30/166 (18%)
Homeobox 301..354 CDD:395001 32/52 (62%)
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 26/151 (17%)
Homeobox 264..317 CDD:306543 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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