DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and gbx2

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:379 Identity:91/379 - (24%)
Similarity:127/379 - (33%) Gaps:111/379 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SMTSYFTNSYMGA--DMHHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRM------ 66
            |.|::..:|.:|.  ....||:...|                       ||.|.||..:      
Zfish    18 STTAFSIDSLIGGPPQPSPGHFVYTG-----------------------YPMFMPYRSVVLPPPP 59

  Fly    67 ----PYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQP-----SQN 122
                |......:.....|  :..|..|||....:   ||     |:..........|     |.:
Zfish    60 PPPPPTLPQSALPTTHPH--HPIPGLPSSFCSSL---AQ-----GMALTSTLMATLPGGFSSSPS 114

  Fly   123 QQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGS-PPLVDQM 186
            ||.|.|.:          ::..|..|....:.|.:     :|....|......:..| |...|..
Zfish   115 QQHQDAAR----------KLGSQSIHAMFDKSQDI-----RLDGEDGKTFATKDSTSIPSFHDSQ 164

  Fly   187 SGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQ- 250
            |.|....:       ||.:      |....|  :.|:...:..|............|...|..: 
Zfish   165 SVHTSTVR-------GHSK------DDSKED--DCHRKDESFSMDSDLDYSSDDNGPGNAMCQKE 214

  Fly   251 -GQGPPQMHQG-HPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELE 313
             |.|...:..| |.|...     .|:.|:|                 :.:|.|..:|..|.||||
Zfish   215 DGDGSGGLDDGVHGGNGA-----GNTTSTG-----------------KNRRRRTAFTSEQLLELE 257

  Fly   314 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK-----ENKTKGEP 362
            ||||..:||:...|.:|||||.|:|.|:||||||||.|||:     .|...|||
Zfish   258 KEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNVNSKTGEP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 25/148 (17%)
Homeodomain 298..354 CDD:459649 33/55 (60%)
gbx2NP_694496.1 Homeodomain 242..298 CDD:459649 33/55 (60%)

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