DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and Gbx1

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_056554.1 Gene:Gbx1 / 231044 MGIID:95667 Length:418 Species:Mus musculus


Alignment Length:339 Identity:85/339 - (25%)
Similarity:126/339 - (37%) Gaps:79/339 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GNMPYPRFPPYDRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQL--GVPQQQQQQ 115
            |::.|..:|.:  |||                ||        .|:|||.....|  |:|      
Mouse    98 GHLLYTGYPMF--MPY----------------RP--------LVLPQALAPAPLPAGLP------ 130

  Fly   116 QQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTH-PQQQQQQPVVYASCKLQAAVGGLGMVPEGGS 179
            ...|..:...:.:......|.|.:|.:....|. |...:.....|...:|.||...   .....:
Mouse   131 PLAPLASFAGRLSNTFCAGLGQAVPSMVALTTALPSFAEPPDAYYGPPELAAAAAS---TASRSN 192

  Fly   180 PPLVDQMSGHHMNAQMTLP------HHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVP 238
            |....:.:...::|:..||      .....|......|...:|...:|:.:       .::...|
Mouse   193 PEPAARRTDGALDAEELLPAREKVTEPPPPPPPHFSETFPSLPAEGKVYSS-------DEEKLEP 250

  Fly   239 PVGAPPQGMMHQGQGPP--------QMHQGHPGQHTPPSQNPNSQSSGMP-------SPLYPWMR 288
            |.| .|.|...:.:|..        ....|.||    ....|..:..|.|       :|:...:.
Mouse   251 PAG-DPAGSEQEEEGSGGDSEDSFLDSSAGGPG----ALLGPKPKLKGSPGTGAEEGTPVATGVT 310

  Fly   289 SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 353
            :..||.:.|   |..:|..|.||||||||..:||:...|.:|||||.|:|.|:||||||||.|||
Mouse   311 TPGGKSRRR---RTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 372

  Fly   354 K-----ENKTKGEP 362
            :     .:...|||
Mouse   373 RIKAGNVSSRSGEP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 28/165 (17%)
Homeobox 301..354 CDD:395001 32/52 (62%)
Gbx1NP_056554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..320 20/120 (17%)
Homeobox 319..372 CDD:278475 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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