DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and Pou3f1

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_035271.1 Gene:Pou3f1 / 18991 MGIID:101896 Length:449 Species:Mus musculus


Alignment Length:321 Identity:61/321 - (19%)
Similarity:94/321 - (29%) Gaps:138/321 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 QQQPV-VYASCKLQAAVGG--LGMVPEGG---SPPLVDQM--SGHHMNAQMTLPHHMG-HPQAQL 208
            |.||: :||........||  .||:..||   .|.|...:  .||....:.:.|.|:| |..|  
Mouse   150 QPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHA-- 212

  Fly   209 GYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQG-HPGQHTPPSQNP 272
                         |.:.|..|::...:           .:|.|.|......| |..:..|.|.: 
Mouse   213 -------------HGHAHAGGLHAAAA-----------HLHPGAGGGGSSVGEHSDEDAPSSDD- 252

  Fly   273 NSQSSGMPSPLYPWMRSQFGKCQERKR----------------------GRQTYTRYQTLE---- 311
                           ..||.|..:::|                      .:.|..|::.|:    
Mouse   253 ---------------LEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 302

  Fly   312 -------------------------LEKEFHFNRYLTRRRRIEI--------------------- 330
                                     |:|.....|...:|..||:                     
Mouse   303 NMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEI 367

  Fly   331 ---AHALCLTERQIKIWFQNRRMKWKKENKTKG----------EPGS-GGEGDEITPPNSP 377
               |.:|.|.:..:::||.|||.|.|:.....|          .||. |..|...:||::|
Mouse   368 TGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGSASPPSAP 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 30/175 (17%)
Homeobox 301..354 CDD:395001 18/105 (17%)
Pou3f1NP_035271.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..108
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..152 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..251 17/92 (18%)
POU 245..319 CDD:197673 9/89 (10%)
Homeobox 340..393 CDD:278475 12/52 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..449 9/36 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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