DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and pha-2

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_508131.4 Gene:pha-2 / 187454 WormBaseID:WBGene00004011 Length:214 Species:Caenorhabditis elegans


Alignment Length:130 Identity:45/130 - (34%)
Similarity:66/130 - (50%) Gaps:13/130 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 MMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKC-QERKRGRQTYTRYQTL 310
            :...|:..|    |.|.|....:.|.|.....|..|...|:.....|. |:||.|:..:|..||.
 Worm    77 LSQNGKNRP----GAPNQVPLLNMNVNQTMGNMWDPRLSWLYPYMSKSPQKRKGGQIRFTNEQTD 137

  Fly   311 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPN 375
            .||.:|..::||:.:.|.::|.:|.|:|||:|.||||||.||::..|      .|.:.||:  ||
 Worm   138 ALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWRRVRK------DGEDEDEM--PN 194

  Fly   376  375
             Worm   195  194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 15/59 (25%)
Homeodomain 298..354 CDD:459649 26/55 (47%)
pha-2NP_508131.4 Homeodomain 130..181 CDD:459649 24/50 (48%)

Return to query results.
Submit another query.