DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Pitx3

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_006526827.1 Gene:Pitx3 / 18742 MGIID:1100498 Length:388 Species:Mus musculus


Alignment Length:170 Identity:51/170 - (30%)
Similarity:70/170 - (41%) Gaps:33/170 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 HNMGMYQQQSGVPPVGAPPQGMMH---QGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWM 287
            |::......||..|:..||...:.   :.|.||.|..|..|:....|...:...:|.|.|..|  
Mouse    53 HSLNSACHCSGCYPLPGPPSTEIEDEIKRQRPPSMEFGLLGEAEARSPALSLSDAGTPHPPLP-- 115

  Fly   288 RSQFG-KCQE------------------------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 327
              :.| |.||                        ::|.|..:|..|..|||..|..|||.....|
Mouse   116 --EHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 178

  Fly   328 IEIAHALCLTERQIKIWFQNRRMKW-KKENKTKGEPGSGG 366
            .|||....|||.::::||:|||.|| |:|...:.|...||
Mouse   179 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKGG 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 23/107 (21%)
Homeodomain 298..354 CDD:459649 25/56 (45%)
Pitx3XP_006526827.1 Homeodomain 149..205 CDD:459649 25/55 (45%)
PTZ00395 <228..>322 CDD:185594
OAR 344..361 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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