DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and ceh-27

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001256348.1 Gene:ceh-27 / 185853 WormBaseID:WBGene00000449 Length:263 Species:Caenorhabditis elegans


Alignment Length:122 Identity:36/122 - (29%)
Similarity:59/122 - (48%) Gaps:21/122 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 PGQ--HTPPSQNPNSQSSGMPSPL--YPWMRSQFGKCQ----------------ERKRGRQTYTR 306
            |.|  |...|.|.::..:..|.|:  :|.: :.|.:.|                .|::.|..::.
 Worm    44 PNQYPHDFSSYNTSAAYATAPYPMATHPQL-ANFNRFQTNQLNLGLTTQQNMMISRRKRRVLFSP 107

  Fly   307 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPG 363
            .|...||::|..||||:...|..:|.::.|:..|:||||||:|.|.|::.|.|...|
 Worm   108 QQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEKEKKMDG 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 12/63 (19%)
Homeodomain 298..354 CDD:459649 21/55 (38%)
ceh-27NP_001256348.1 Homeodomain 99..155 CDD:459649 21/55 (38%)

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