DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and alr-1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_509860.1 Gene:alr-1 / 181302 WormBaseID:WBGene00044330 Length:362 Species:Caenorhabditis elegans


Alignment Length:129 Identity:39/129 - (30%)
Similarity:60/129 - (46%) Gaps:34/129 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 GQHTPPSQN------------PNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKE 315
            |:.||...|            ..|.|.|..||      ...|| ::::|.|.|::.:|..||||.
 Worm    78 GKKTPTGDNILEAASVLDNRENGSPSDGTNSP------DDNGK-RKQRRYRTTFSAFQLDELEKV 135

  Fly   316 F---HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGE---------PGSGGE 367
            |   |:....||.   |:|..:.|||.::::||||||.|::|:.::...         |.|.|:
 Worm   136 FARTHYPDVFTRE---ELATRVQLTEARVQVWFQNRRAKYRKQERSSTHHPYQAPMSIPNSNGD 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 14/54 (26%)
Homeodomain 298..354 CDD:459649 24/58 (41%)
alr-1NP_509860.1 Homeodomain 118..174 CDD:459649 24/58 (41%)

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