DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and vab-15

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_509648.1 Gene:vab-15 / 181197 WormBaseID:WBGene00006881 Length:225 Species:Caenorhabditis elegans


Alignment Length:133 Identity:40/133 - (30%)
Similarity:59/133 - (44%) Gaps:25/133 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 PPQMHQGHPGQHTPPSQNPNSQSSGMPSPL-----YPWMRSQ---------------FGKCQERK 298
            |..::....|...|...:.:|..|...|||     ..|:.||               ..||..||
 Worm    61 PVMIYFAQTGNRLPIVSSDSSPESCASSPLSMQHSLQWLSSQREDSPTSDDAKIQIGLSKCMLRK 125

  Fly   299 -----RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 358
                 :.|..::..|.:.||::|...:||:...|.|.:.:|.|||.|:||||||||.|.|:..:.
 Worm   126 HKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQNRRAKSKRLQEA 190

  Fly   359 KGE 361
            :.|
 Worm   191 EVE 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 16/76 (21%)
Homeodomain 298..354 CDD:459649 24/60 (40%)
vab-15NP_509648.1 Homeodomain 130..186 CDD:459649 23/55 (42%)

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