DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and nob-1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001369824.1 Gene:nob-1 / 176641 WormBaseID:WBGene00003779 Length:243 Species:Caenorhabditis elegans


Alignment Length:264 Identity:71/264 - (26%)
Similarity:106/264 - (40%) Gaps:47/264 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 QQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASC-----KLQAAVGGLGMVPEGGSPPLV 183
            ||.....:|:..::.:..|          ||.|..:.|.     .:|...........|.||.|.
 Worm     6 QQMINNDSPEDSKESITSV----------QQTPFFWPSAAAAIPSIQGESRSERESETGSSPQLA 60

  Fly   184 DQMSGHHMNAQMTLPHHMG----HPQAQLGYTDVGV---PDVTEVHQNH-HNMGMYQQQSGVPPV 240
            ...:|      |.:|...|    .|.......:.|:   |..|:.:||. .:.|.|.       .
 Worm    61 PSSTG------MVMPGTAGMYGFGPSRMPTANEFGMMMNPVYTDFYQNPLASTGWYS-------Y 112

  Fly   241 GAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLY-PWMRSQFGKCQERKRGRQTY 304
            |.|.|  .......|.: .|:....|.|:...:|.::...:.:: ||..|..|     |:.||.|
 Worm   113 GQPYQ--FTANYSIPSL-DGNLSDITIPTTAGSSAATTPNAAMHLPWAISHDG-----KKKRQPY 169

  Fly   305 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGD 369
            .:.|...||.|:..|:|||.:||.|::..|.|.|:|:|:||||||||.||..:....|..  .|.
 Worm   170 KKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKLRQRHSGPFP--HGA 232

  Fly   370 EITP 373
            .:||
 Worm   233 PVTP 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 34/158 (22%)
Homeodomain 298..354 CDD:459649 28/55 (51%)
nob-1NP_001369824.1 Homeodomain 163..219 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.