Protein Alignment Antp and lin-39

DIOPT Version :9

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 251
• Identity: 82/251 - (32%)
• Similarity: 109/251 - (43%)
• Gaps: 47/251 - (18%)

  Fly   145 QVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLG 209
            :.|.|:.........:|....::||..| :|  .|..|...:....|.|...|..|.|.     .
 Worm    14 RATAPESSSSSSSSSSSSSSTSSVGASG-IP--SSSELSSTIGYDPMTASAALSAHFGS-----Y 70

  Fly   210 YTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPN- 273
            |.......:.....:...:|..|    .|.:|  .|.:.:   .|......|..:|.....:.:
 Worm    71 YDPTSSSQIASYFASSQGLGGPQ----YPILG--DQSLCY---NPSVTSTHHDWKHLEGDDDDDK 126

  Fly   274 --------------SQSSGMPSPLYPWM---RSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRY 321
                          .::||  ..:||||   .|..|..:..||.|..|||.|.||||||||.::|
 Worm   127 DDDKKGISGDDDDMDKNSG--GAVYPWMTRVHSTTGGSRGEKRQRTAYTRNQVLELEKEFHTHKY 189

  Fly   322 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSP 377
            |||:||||:||:|.|||||:||||||||||.|||||.|          .:|||..|
 Worm   190 LTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKDK----------PMTPPMMP 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	33/162 (20%)
		Homeobox	301..354	CDD:395001	39/52 (75%)
lin-39	NP_001021164.1	Homeobox	169..221	CDD:278475	39/51 (76%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S2996
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.760