DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Hoxa4

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_032291.1 Gene:Hoxa4 / 15401 MGIID:96176 Length:285 Species:Mus musculus


Alignment Length:342 Identity:107/342 - (31%)
Similarity:127/342 - (37%) Gaps:132/342 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PRFPPYDRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQN 122
            |:|||::....:.|.|                    ||   .....|..|.|             
Mouse    15 PKFPPFEEFAPHGGPG--------------------GG---DGAVGGGPGYP------------- 43

  Fly   123 QQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYA-SCKLQAAVGGLGMVP--------EGG 178
                :.|.||     .||     ..:|...:|.|..|| ..:..:..|||...|        .|.
Mouse    44 ----RPQSAP-----HLP-----APNPHAARQPPAYYAPRAREPSYPGGLYPAPAAACPYACRGA 94

  Fly   179 SPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAP 243
            ||...:|.           |....||                              |..|...||
Mouse    95 SPARPEQS-----------PAPGAHP------------------------------SPAPQPPAP 118

  Fly   244 PQGMMHQGQGP--PQMHQGHPGQHTP---PSQNPNSQSSGMPSPLYPWMR--------SQFGKCQ 295
            |:   |...||  |.:..|......|   ..|.| :...|....:||||:        |.:.. .
Mouse   119 PR---HCAPGPTTPAVATGGSAPACPLLLADQGP-AGPKGKEPVVYPWMKKIHVSAVNSSYNG-G 178

  Fly   296 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK--- 357
            |.||.|..|||.|.|||||||||||||||||||||||.|||:|||:|||||||||||||::|   
Mouse   179 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 243

  Fly   358 TK-----------GEPG 363
            ||           |.||
Mouse   244 TKMRSSNTASAPAGPPG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 35/165 (21%)
Homeodomain 298..354 CDD:459649 47/55 (85%)
Hoxa4NP_032291.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..70 18/100 (18%)
PHA03247 <43..161 CDD:223021 36/189 (19%)
Antp-type hexapeptide 159..164 3/4 (75%)
Homeodomain 181..237 CDD:459649 47/55 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..285 6/23 (26%)

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