DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Hoxa4

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_032291.1 Gene:Hoxa4 / 15401 MGIID:96176 Length:285 Species:Mus musculus


Alignment Length:342 Identity:107/342 - (31%)
Similarity:127/342 - (37%) Gaps:132/342 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PRFPPYDRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQN 122
            |:|||::....:.|.|                    ||   .....|..|.|             
Mouse    15 PKFPPFEEFAPHGGPG--------------------GG---DGAVGGGPGYP------------- 43

  Fly   123 QQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYA-SCKLQAAVGGLGMVP--------EGG 178
                :.|.||     .||     ..:|...:|.|..|| ..:..:..|||...|        .|.
Mouse    44 ----RPQSAP-----HLP-----APNPHAARQPPAYYAPRAREPSYPGGLYPAPAAACPYACRGA 94

  Fly   179 SPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAP 243
            ||...:|.           |....||                              |..|...||
Mouse    95 SPARPEQS-----------PAPGAHP------------------------------SPAPQPPAP 118

  Fly   244 PQGMMHQGQGP--PQMHQGHPGQHTP---PSQNPNSQSSGMPSPLYPWMR--------SQFGKCQ 295
            |:   |...||  |.:..|......|   ..|.| :...|....:||||:        |.:.. .
Mouse   119 PR---HCAPGPTTPAVATGGSAPACPLLLADQGP-AGPKGKEPVVYPWMKKIHVSAVNSSYNG-G 178

  Fly   296 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK--- 357
            |.||.|..|||.|.|||||||||||||||||||||||.|||:|||:|||||||||||||::|   
Mouse   179 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPN 243

  Fly   358 TK-----------GEPG 363
            ||           |.||
Mouse   244 TKMRSSNTASAPAGPPG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 35/165 (21%)
Homeobox 301..354 CDD:395001 45/52 (87%)
Hoxa4NP_032291.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..70 18/100 (18%)
Antp-type hexapeptide 159..164 3/4 (75%)
Homeobox 183..236 CDD:278475 44/52 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..285 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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