DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and Hlx

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_032276.1 Gene:Hlx / 15284 MGIID:96109 Length:476 Species:Mus musculus


Alignment Length:298 Identity:81/298 - (27%)
Similarity:116/298 - (38%) Gaps:92/298 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PQQL-------QQQLPQVTQQVTHPQQ-QQQQPVVYASCKLQAAVGGLGMVP-EGGSPPL----- 182
            ||:|       .|.|||  |..|..|| |||.|....:..||....|..:|| ..||.|.     
Mouse   108 PQRLSPLSAAFHQHLPQ--QSPTQQQQPQQQPPPPPRAVSLQPPTSGTRVVPHHSGSAPAPSSKD 170

  Fly   183 ----VDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAP 243
                :|::    ::|:.       .|:.:.|.|   :.|:|.:            .:|..|.|..
Mouse   171 LKFGIDRI----LSAEF-------DPKVKEGNT---LRDLTSL------------LTGGRPAGVH 209

  Fly   244 PQGMMHQGQGPPQMHQGHPGQH--------------TPPSQNPNSQ-----SSGMPSPLYPWMRS 289
            ..|:           |...||.              :|.|.||.:.     ....|.|.....:.
Mouse   210 LAGL-----------QPSAGQFFASLDPISEASAILSPLSSNPRNSVQHQFQDTFPGPYAVLTKD 263

  Fly   290 QFGKCQERKR--GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 352
            ...:..:|||  .|..::..|...|||.|...:|:|:..|.::|..|.||:.|:|:|||||||||
Mouse   264 TMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKW 328

  Fly   353 ---------KKENKTKGEPGSG-----GEGDEITPPNS 376
                     |.::|..||..||     ||.:|.:|..|
Mouse   329 RHSKEAQAQKDKDKEAGEKPSGGVPAEGEREERSPSRS 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 32/175 (18%)
Homeodomain 298..354 CDD:459649 26/66 (39%)
HlxNP_032276.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..169 20/50 (40%)
Homeodomain 270..330 CDD:459649 27/59 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..401 12/39 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..476
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.