DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Gsx1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_032204.1 Gene:Gsx1 / 14842 MGIID:95842 Length:261 Species:Mus musculus


Alignment Length:234 Identity:72/234 - (30%)
Similarity:89/234 - (38%) Gaps:77/234 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 PEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYT-------DVGV----PDVTEVHQNHHNM 228
            |||..|||              .|:.:..|.|..|.:       ..|:    |......|.|...
Mouse    21 PEGSPPPL--------------FPYAVPPPHALHGLSPGACHARKAGLLCVCPLCVTASQLHGPP 71

  Fly   229 GMYQQQSGVPP------VGAPPQGMMHQGQGPPQMHQGHPG-QHTP--------------PSQNP 272
            |        ||      ...||.|..:......:.|...|| .|.|              |..:|
Mouse    72 G--------PPALPLLKASFPPFGSQYCHAPLGRQHSVSPGVAHGPAAAAAAAALYQTSYPLPDP 128

  Fly   273 --------NSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 329
                    :|.|:.:||               .||.|..:|..|.||||:||..|.||:|.||||
Mouse   129 RQFHCISVDSSSNQLPS---------------SKRMRTAFTSTQLLELEREFASNMYLSRLRRIE 178

  Fly   330 IAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEG 368
            ||..|.|:|:|:||||||||:|.|||.|.....|..|.|
Mouse   179 IATYLNLSEKQVKIWFQNRRVKHKKEGKGSNHRGGAGAG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 34/170 (20%)
Homeodomain 298..354 CDD:459649 34/55 (62%)
Gsx1NP_032204.1 SNAG domain. /evidence=ECO:0000250 1..20
Homeodomain 147..203 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..261 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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