DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and gbx1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_777286.1 Gene:gbx1 / 142985 ZFINID:ZDB-GENE-020117-2 Length:316 Species:Danio rerio


Alignment Length:296 Identity:73/296 - (24%)
Similarity:102/296 - (34%) Gaps:123/296 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 PEG-GSPPLVDQMSGHHMNAQMTLPHHM---GHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQS 235
            |.| |:...:|.:.|    .....|.|:   |:|.. :.|..:.:|...    :|.::     .|
Zfish     4 PSGTGTAFSIDSLIG----TPQPRPGHLLYTGYPMF-MPYRPLMIPQAL----SHSSL-----PS 54

  Fly   236 GVPPVGAPPQGMMHQ---------GQGPPQM---------HQGHPGQHTPPSQNP----NSQSSG 278
            |:||: ||......:         |||.|.|         ....|....||.:.|    .:..:|
Zfish    55 GIPPL-APLASFAGRLTNTFCAGLGQGMPSMVALTTTLPSFSDPPDSFYPPQEMPGPRLGADGTG 118

  Fly   279 M---PSP------------------------LYPW------MRSQFGKCQER------------- 297
            |   .||                        ||..      :::....|.:|             
Zfish   119 MNRQESPHDELKGSELLNFTETFQAVAGETKLYSSDDEKLDLKAAEAACSDREDSSADSENESFS 183

  Fly   298 -------------------------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 331
                                           :|.|..:|..|.||||||||..:||:...|.:||
Zfish   184 DGNTCASASQKGKLKGGSQDALPPGGSAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIA 248

  Fly   332 HALCLTERQIKIWFQNRRMKWKK-----ENKTKGEP 362
            |||.|:|.|:||||||||.|||:     .|...|||
Zfish   249 HALKLSEVQVKIWFQNRRAKWKRIKAGNVNNRSGEP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 37/233 (16%)
Homeodomain 298..354 CDD:459649 33/55 (60%)
gbx1NP_777286.1 Homeodomain 215..271 CDD:459649 33/55 (60%)

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