DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Pitx1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_446076.1 Gene:Pitx1 / 113983 RGDID:69253 Length:315 Species:Rattus norvegicus


Alignment Length:156 Identity:43/156 - (27%)
Similarity:61/156 - (39%) Gaps:36/156 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 MGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSS--------------- 277
            |.:.:...|:.|...||..|      .|..|.........|.:|..|:||               
  Rat     8 MSLERLPEGLRPPPPPPHDM------GPSFHLARTADPREPLENSASESSDADLPDKERGGEAKV 66

  Fly   278 ---------GMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 333
                     |..|...|      .|.::::|.|..:|..|..|||..|..|||.....|.|||..
  Rat    67 PEDGGAGSAGCGSAEDP------AKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVW 125

  Fly   334 LCLTERQIKIWFQNRRMKWKKENKTK 359
            ..|||.::::||:|||.||:|..:.:
  Rat   126 TNLTEPRVRVWFKNRRAKWRKRERNQ 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 19/101 (19%)
Homeodomain 298..354 CDD:459649 25/55 (45%)
Pitx1NP_446076.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 21/106 (20%)
Homeodomain 90..146 CDD:459649 25/55 (45%)
Interaction with PIT-1. /evidence=ECO:0000250 149..280 0/3 (0%)
OAR 277..294 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 281..294
Nuclear localization signal. /evidence=ECO:0000255 287..291
Blue background indicates that the domain is not in the aligned region.

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