Protein Alignment Antp and Hoxa11

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001123350.1
• Gene: Hoxa11 / 103692131
• RGDID: 1564605
• Length: 313
• Species: Rattus norvegicus
• Alignment Length: 289
• Identity: 79/289 - (27%)
• Similarity: 114/289 - (39%)
• Gaps: 65/289 - (22%)

  Fly   119 PSQNQQQQQAQQAPQQLQQQLPQV--TQQVT------------HPQQQ-----QQQPVVYASCKL 164
            ||...|...::.........||||  .::||            ||:..     ..:.:|:..| |
  Rat    32 PSFLPQTPSSRPMTYSYSSNLPQVQPVREVTFREYAIEPATKWHPRGNLAHCYSAEELVHRDC-L 95

  Fly   165 QA--AVGGLGMVPEGGSPPLVDQMSGHH------MNAQMTLPHHMGHPQA--QLGYTDVGVPDVT 219
            ||  |.|..|.|....|..:.     ||      .|...|:..:...|||  |...|..|.|:
  Rat    96 QAPSAAGVPGDVLAKSSANVY-----HHPTPAVSSNFYSTVGRNGVLPQAFDQFFETAYGTPE-- 153

  Fly   220 EVHQNHHNM------GMYQQQSGVP-------------PVGAPPQGMMHQGQGPPQMHQGHPGQH 265
                   |:      |....:.|.|             ..|||.......|.|..  .|....:.
  Rat   154 -------NLASSDYPGDKNAEKGPPTAAATSAAAVAAAATGAPATSSSDGGGGGG--CQEAAAEE 209

  Fly   266 TPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 330
            ....:.|.|.||...|..:...::.....|..::.|..||:||..|||:||.|:.|:.:.:|:::
  Rat   210 KERRRRPESSSSPESSSGHTEDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQL 274

  Fly   331 AHALCLTERQIKIWFQNRRMKWKKENKTK 359
            :..|.||:||:||||||||||.||.|:.:
  Rat   275 SRMLNLTDRQVKIWFQNRRMKEKKINRDR 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	38/173 (22%)
		Homeodomain	298..354	CDD:459649	28/55 (51%)
Hoxa11	NP_001123350.1	DUF3528	26..154	CDD:432284	32/136 (24%)
		Homeodomain	242..298	CDD:459649	28/55 (51%)