DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and nkx2-1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_002935383.1 Gene:nkx2-1 / 100135015 XenbaseID:XB-GENE-485985 Length:346 Species:Xenopus tropicalis


Alignment Length:244 Identity:58/244 - (23%)
Similarity:91/244 - (37%) Gaps:53/244 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 PQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHP 204
            |.....:..|.::..:.|...|..|.|.:.......:.....:.....||  |..::..:||   
 Frog    10 PFSVSDILSPLEESYKKVAMESAGLGAPLSAAYRQSQVSQASMQQHGMGH--NGPVSAAYHM--- 69

  Fly   205 QAQLGYTDVGVPDVTEVHQNHH---NMGMYQQQSGVPP-------------VGAPPQ---GMMHQ 250
                  |..|||.::......:   |:|.....|.:||             .||.|.   ..:.:
 Frog    70 ------TAAGVPQLSHTTMGGYCNGNLGNLGNMSELPPYQDTMRNSSATGWYGANPDPRFSTISR 128

  Fly   251 GQGPPQ-MHQGHPGQHTPPSQNPNSQSSG----MPSPLYPWMRSQFGKCQERKRGRQTYTRYQTL 310
            ..||.. |:.|..|         |..|.|    ..:||         :...|::.|..:::.|..
 Frog   129 FMGPSSGMNMGGLG---------NMGSLGDVGKSMTPL---------QATPRRKRRVLFSQAQVY 175

  Fly   311 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            |||:.|...:||:...|..:|..:.||..|:||||||.|.|.|::.|.|
 Frog   176 ELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDK 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 32/168 (19%)
Homeodomain 298..354 CDD:459649 21/55 (38%)
nkx2-1XP_002935383.1 Homeodomain 163..219 CDD:459649 21/55 (38%)

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