DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxb5

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:360 Identity:110/360 - (30%)
Similarity:130/360 - (36%) Gaps:126/360 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MTSYFTNSYM-----GADMHHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYN 70
            |:|||.||:.     |.|.|..:|.....::|...    |.:.|.......|.          ||
 Frog     1 MSSYFVNSFSGRYPNGPDYHVLNYGTGSSSNLSGS----YREAAGSMQPSAYG----------YN 51

  Fly    71 GQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQL 135
            ..|||..     .||..:.||..|                    ....|.|..:.:..|..|...
 Frog    52 YNGMDLS-----VSRAAASSSHYG--------------------DSAFPGQESRFRANQSCPLAT 91

  Fly   136 QQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHH 200
            ...||                     |                       ...|......|.|..
 Frog    92 PDPLP---------------------C-----------------------AKSHKDELSPTDPAT 112

  Fly   201 MGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQH 265
            .....||.          |||.:.  :.....::|..|...|||:.:.....         ||..
 Frog   113 SAGSSAQF----------TEVEET--SASSETEESSTPRSSAPPRALQENSS---------PGAA 156

  Fly   266 TPPSQNPNSQSSGMPSPLYPWMR------SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTR 324
            ....|||.         ::||||      ...|  .:.||.|..|||||||||||||||||||||
 Frog   157 GTDGQNPQ---------IFPWMRKLHINHDMTG--PDGKRARTAYTRYQTLELEKEFHFNRYLTR 210

  Fly   325 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            ||||||||||||:|||||||||||||||||:||.|
 Frog   211 RRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 28/150 (19%)
Homeobox 301..354 CDD:395001 49/52 (94%)
hoxb5NP_001094494.1 Homeobox 187..240 CDD:365835 49/52 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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