DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxb2

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_012808332.1 Gene:hoxb2 / 100038155 XenbaseID:XB-GENE-478525 Length:340 Species:Xenopus tropicalis


Alignment Length:153 Identity:59/153 - (38%)
Similarity:74/153 - (48%) Gaps:31/153 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 GMMHQGQGPPQMHQGHPGQHTP---PSQNPNSQSSGMPSPLYPWMRSQFGKCQE----------R 297
            |::.|    ||:..||.....|   ..::....|.|.|..|.|...|..|...|          .
 Frog    73 GLLQQ----PQVQPGHLATEFPWMKEKKSAKKSSQGSPQALIPPPESAGGSPAEPPGLHDAGGGS 133

  Fly   298 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK--- 359
            :|.|..||..|.||||||||||:||.|.||:|||..|.|||||:|:||||||||.|::.:.|   
 Frog   134 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHKDSQ 198

  Fly   360 -----------GEPGSGGEGDEI 371
                       |||...|:...:
 Frog   199 DGEHSYSNPEDGEPLDDGDDSPV 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 18/72 (25%)
Homeodomain 298..354 CDD:459649 38/55 (69%)
hoxb2XP_012808332.1 Homeodomain 134..190 CDD:459649 38/55 (69%)

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