DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxa2

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_004915456.1 Gene:hoxa2 / 100038099 XenbaseID:XB-GENE-488087 Length:373 Species:Xenopus tropicalis


Alignment Length:186 Identity:64/186 - (34%)
Similarity:79/186 - (42%) Gaps:57/186 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 PPVGAPPQ-------GMMHQGQGPPQMHQ--------GHPGQHTPPSQNPNSQS-----SGMPSP 282
            ||||...|       .:.|....||...|        .|| :|:.|..:||...     :|...|
 Frog    26 PPVGDTFQSSSIKSSALSHSTLIPPPFEQTIPSLNPGSHP-RHSRPKHSPNGHGDSPVPAGSLPP 89

  Fly   283 LYPWMRSQFGK----------------------CQERK--------------RGRQTYTRYQTLE 311
            .||||:.:...                      |...|              |.|..||..|.||
 Frog    90 EYPWMKEKKASKKAPIAAATAAAAASAAPATTACLSHKEIIEIQDNSSGGSRRLRTAYTNTQLLE 154

  Fly   312 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGE 367
            ||||||||:||.|.||:|||..|.|||||:|:||||||||.|::.:.|......|:
 Frog   155 LEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNGDGK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 26/123 (21%)
Homeobox 301..354 CDD:395001 37/52 (71%)
hoxa2XP_004915456.1 Homeobox 144..197 CDD:365835 37/52 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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