DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and HB-1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_186796.1 Gene:HB-1 / 821138 AraportID:AT3G01470 Length:272 Species:Arabidopsis thaliana


Alignment Length:129 Identity:32/129 - (24%)
Similarity:51/129 - (39%) Gaps:14/129 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 NGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHR-IVTAPNGAGDFNWSHIEETLA 248
            |..|..|..:...|:..|..::...|..|.:|...:.:....| ..::|           |:...
plant     4 NSFFFDPSASHGNSMFFLGNLNPVVQGGGARSMMNMEETSKRRPFFSSP-----------EDLYD 57

  Fly   249 SDCKDSK--RTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSK 310
            .|..|.:  ..::..|..|...|||.|.....:...|:..:|..|.|..||:.:||||||.:.|
plant    58 DDFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 11/63 (17%)
Homeodomain 255..311 CDD:459649 19/58 (33%)
KLF1_2_4_N <321..404 CDD:425360
HB-1NP_186796.1 Homeodomain 68..121 CDD:459649 18/52 (35%)
HALZ 123..164 CDD:460477
Blue background indicates that the domain is not in the aligned region.

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